Vibrio parahaemolyticus strain R14

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio parahaemolyticus strain R14 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and demonstrates facultative anaerobic metabolism. This strain is nonsporulating and thrives optimally at a temperature of 20.0°C, indicating a preference for cooler aquatic environments. As a heterotroph, V. parahaemolyticus strain R14 relies on organic compounds as its energy source, which aligns with its aquatic habitat where organic matter is often available. The ecological role of V. parahaemolyticus strain R14 in marine ecosystems may involve the degradation of organic materials, contributing to nutrient cycling. Its ability to survive in varying oxygen conditions allows it to inhabit diverse niches within aquatic environments, from oxygen-rich surface waters to more anoxic sediment layers. This adaptability not only aids in its survival but also suggests a potential role in the dynamics of microbial communities in marine habitats, influencing the availability of nutrients and the overall health of the ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio parahaemolyticus
Strainstrain R14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio parahaemolyticus strain R14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio parahaemolyticus strain R14


Gene Summary

Adenine Count

497153 bp

Thymine Count

494654 bp

Guanine Count

412326 bp

Cytosine Count

413907 bp

Genome Length

1818040 bp

Protein-coding Genes

1586 genes

Non-Coding Genes

17 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lysm peptidoglycan-binding domain-containing proteinC9I78_RS17320Not Available-132 - 200369570.8
recombinase family proteinC9I78_RS17325Not Available+2246 - 286923359.2
Trna-glyNot AvailableNot Available+3035 - 3105Not Available
duf4136 domain-containing proteinC9I78_RS17335Not Available+3672 - 419018956.3
hypothetical proteinC9I78_RS17340Not Available+4301 - 471715317.0
deda family proteinC9I78_RS17345Not Available+4767 - 544424502.4
hypothetical proteinC9I78_RS17350Not Available-5558 - 588112119.0
hypothetical proteinC9I78_RS17355Not Available-5963 - 643318033.6
murein l,d-transpeptidase catalytic domain family proteinC9I78_RS17360Not Available-6719 - 736023930.8
5'-methylthioadenosine/adenosylhomocysteine nucleosidaseC9I78_RS17370Not Available+8644 - 940227230.9

Displaying genes 1 – 10 of 1603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites