Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase family protein | C4F17_RS02955 | Not Available | Positive | 655965 - 656570 | 22287.7 |
| propionate--coa ligase | C4F17_RS02960 | Not Available | Positive | 656695 - 658629 | 70275.4 |
| 2-oxoglutarate dehydrogenase e1 component | C4F17_RS02965 | Not Available | Positive | 658809 - 661685 | 106162.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | C4F17_RS02970 | Not Available | Positive | 661742 - 663013 | 43854.0 |
| dihydrolipoyl dehydrogenase | C4F17_RS02975 | Not Available | Positive | 663159 - 664586 | 50282.4 |
| cell division protein zape | C4F17_RS02980 | Not Available | Positive | 664591 - 665691 | 42276.0 |
| hypothetical protein | C4F17_RS02985 | Not Available | Positive | 665688 - 666368 | 25100.2 |
| pp2c family protein-serine/threonine phosphatase | C4F17_RS02990 | Not Available | Negative | 666399 - 667169 | 27976.6 |
| ydch family protein | C4F17_RS02995 | Not Available | Positive | 667276 - 667479 | 7813.41 |
| atp-dependent dna helicase | C4F17_RS03000 | Not Available | Positive | 667476 - 669563 | 75753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
