Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyhydroxyalkanoate depolymerase | C4F17_RS02800 | Not Available | Negative | 621562 - 623001 | 53649.0 |
| amino acid aminotransferase | C4F17_RS02805 | Not Available | Negative | 623160 - 624356 | 42608.3 |
| excinuclease abc subunit uvrb | C4F17_RS02810 | Not Available | Positive | 624462 - 626570 | 79557.4 |
| fe-s cluster assembly transcriptional regulator iscr | C4F17_RS02815 | Not Available | Positive | 626813 - 627349 | 19304.4 |
| iscs subfamily cysteine desulfurase | C4F17_RS02820 | Not Available | Positive | 627450 - 628670 | 45194.3 |
| fe-s cluster assembly scaffold iscu | C4F17_RS02825 | Not Available | Positive | 628721 - 629140 | 14592.3 |
| iron-sulfur cluster assembly protein isca | C4F17_RS02830 | Not Available | Positive | 629142 - 629465 | 11766.1 |
| fe-s protein assembly co-chaperone hscb | C4F17_RS02835 | Not Available | Positive | 629529 - 630047 | 19566.1 |
| fe-s protein assembly chaperone hsca | C4F17_RS02840 | Not Available | Positive | 630139 - 632004 | 65539.9 |
| isc system 2fe-2s type ferredoxin | C4F17_RS02845 | Not Available | Positive | 632014 - 632352 | 12385.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
