Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reverse transcriptase family protein | C4F17_RS02450 | Not Available | Negative | 544643 - 546586 | 71078.5 |
| swim zinc finger family protein | C4F17_RS02455 | Not Available | Negative | 546870 - 548576 | 64339.6 |
| heat repeat domain-containing protein | C4F17_RS02460 | Not Available | Negative | 548573 - 551758 | 116571.0 |
| dna ligase | C4F17_RS02470 | Not Available | Positive | 551897 - 552991 | 39355.6 |
| plp-dependent aminotransferase family protein | C4F17_RS02475 | Not Available | Negative | 552998 - 554434 | 51727.7 |
| nad-dependent epimerase/dehydratase family protein | C4F17_RS02480 | Not Available | Positive | 554525 - 555268 | 25501.8 |
| cupin domain-containing protein | C4F17_RS02485 | Not Available | Positive | 555378 - 555797 | 14547.5 |
| duf6882 domain-containing protein | C4F17_RS02490 | Not Available | Negative | 555805 - 556545 | 26903.8 |
| duf2845 domain-containing protein | C4F17_RS02495 | Not Available | Negative | 556576 - 556935 | 12655.2 |
| hypothetical protein | C4F17_RS02500 | Not Available | Positive | 557128 - 557388 | 8822.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
