Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | C4F17_RS27420 | Not Available | Negative | 5832483 - 5833460 | 34157.7 |
| adenosine deaminase family protein | C4F17_RS27425 | Not Available | Negative | 5833469 - 5834560 | 40960.7 |
| lysr family transcriptional regulator | C4F17_RS27430 | Not Available | Positive | 5834649 - 5835602 | 34628.2 |
| n-acetyltransferase | C4F17_RS27435 | Not Available | Negative | 5835608 - 5836237 | 24263.3 |
| universal stress protein | C4F17_RS27440 | Not Available | Negative | 5836234 - 5837127 | 31923.6 |
| polyhydroxyalkanoate depolymerase | C4F17_RS27445 | Not Available | Negative | 5837478 - 5838698 | 45605.8 |
| glutathione s-transferase family protein | C4F17_RS27450 | Not Available | Positive | 5838780 - 5839436 | 24138.4 |
| dopa 4,5-dioxygenase family protein | C4F17_RS27455 | Not Available | Negative | 5839461 - 5839808 | 13108.5 |
| duf4166 domain-containing protein | C4F17_RS27460 | Not Available | Negative | 5839816 - 5840448 | 24232.3 |
| polyketide cyclase | C4F17_RS27465 | Not Available | Negative | 5840454 - 5841506 | 38693.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
