Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | C4F17_RS27060 | Not Available | Negative | 5756974 - 5758215 | 45895.6 |
| mandelate racemase/muconate lactonizing enzyme family protein | C4F17_RS27065 | Not Available | Negative | 5758504 - 5759670 | 42536.1 |
| sdr family nad(p)-dependent oxidoreductase | C4F17_RS27070 | Not Available | Negative | 5759706 - 5760413 | 23596.4 |
| bug family tripartite tricarboxylate transporter substrate binding protein | C4F17_RS27075 | Not Available | Negative | 5760403 - 5761374 | 34047.3 |
| dihydrodipicolinate synthase family protein | C4F17_RS27080 | Not Available | Negative | 5761434 - 5762372 | 33654.6 |
| lysr family transcriptional regulator | C4F17_RS27085 | Not Available | Positive | 5762481 - 5763416 | 33245.6 |
| rraa family protein | C4F17_RS27090 | Not Available | Negative | 5763422 - 5764093 | 23779.5 |
| aspartate transaminase | C4F17_RS27095 | Not Available | Negative | 5764124 - 5765338 | 43165.9 |
| nitrogen assimilation transcriptional regulator nac | C4F17_RS27100 | Not Available | Positive | 5765482 - 5766420 | 33365.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | C4F17_RS27105 | Not Available | Positive | 5766549 - 5766992 | 15508.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
