Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | C4F17_RS26330 | Not Available | Positive | 5619363 - 5620310 | 31392.1 |
| abc transporter permease | C4F17_RS26335 | Not Available | Positive | 5620336 - 5621388 | 36298.2 |
| substrate-binding domain-containing protein | C4F17_RS26340 | Not Available | Positive | 5621402 - 5622406 | 35500.9 |
| sugar abc transporter atp-binding protein | C4F17_RS26345 | Not Available | Positive | 5622418 - 5623995 | 56674.7 |
| abc transporter permease | C4F17_RS26350 | Not Available | Positive | 5623992 - 5625029 | 36176.4 |
| indolepyruvate ferredoxin oxidoreductase family protein | C4F17_RS26355 | Not Available | Positive | 5625181 - 5628792 | 130535.0 |
| phosphate acetyltransferase | C4F17_RS26360 | Not Available | Negative | 5628803 - 5629756 | 32474.7 |
| sir2 family nad-dependent protein deacylase | C4F17_RS26365 | Not Available | Positive | 5629854 - 5630570 | 26086.9 |
| hcp family type vi secretion system effector | C4F17_RS26370 | Not Available | Positive | 5630825 - 5631307 | 17197.2 |
| type vi secretion system vgr family protein | C4F17_RS26375 | Not Available | Positive | 5631349 - 5634522 | 114392.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
