Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor flia | C4F17_RS25880 | Not Available | Positive | 5513166 - 5513954 | 29653.4 |
| glycoside hydrolase family 15 protein | C4F17_RS25885 | Not Available | Positive | 5514062 - 5515951 | 69825.7 |
| gluconokinase | C4F17_RS25890 | Not Available | Negative | 5515917 - 5516456 | 19566.4 |
| glucose 1-dehydrogenase | C4F17_RS25895 | Not Available | Negative | 5516461 - 5517222 | 26160.5 |
| 2-hydroxyacid dehydrogenase | C4F17_RS25900 | Not Available | Positive | 5517387 - 5518340 | 33517.2 |
| l-idonate 5-dehydrogenase | C4F17_RS25905 | Not Available | Positive | 5518360 - 5519424 | 37617.0 |
| laci family dna-binding transcriptional regulator | C4F17_RS25910 | Not Available | Negative | 5519431 - 5520441 | 36080.3 |
| lysr family transcriptional regulator | C4F17_RS25915 | Not Available | Negative | 5520666 - 5521565 | 32463.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | C4F17_RS25920 | Not Available | Positive | 5521709 - 5522743 | 35503.1 |
| fad-dependent oxidoreductase | C4F17_RS25925 | Not Available | Positive | 5522745 - 5524070 | 46111.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
