Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C4F17_RS32900 | Not Available | Positive | 5246361 - 5246522 | 5763.93 |
| intradiol ring-cleavage dioxygenase | C4F17_RS24575 | Not Available | Positive | 5246519 - 5247370 | 30140.0 |
| outer membrane protein assembly factor bama | C4F17_RS24580 | Not Available | Negative | 5247441 - 5249843 | 88260.7 |
| nuclease-related domain-containing protein | C4F17_RS24585 | Not Available | Negative | 5249919 - 5250527 | 22928.8 |
| porin | C4F17_RS24590 | Not Available | Positive | 5250730 - 5251890 | 40212.4 |
| hypothetical protein | C4F17_RS24595 | Not Available | Positive | 5251976 - 5252194 | 7548.25 |
| atp-binding protein | C4F17_RS24600 | Not Available | Positive | 5252191 - 5252802 | 21575.3 |
| response regulator transcription factor | C4F17_RS24605 | Not Available | Positive | 5253017 - 5253700 | 25101.5 |
| sensor histidine kinase | C4F17_RS24610 | Not Available | Positive | 5253697 - 5255067 | 49040.2 |
| tripartite tricarboxylate transporter tctb family protein | C4F17_RS24615 | Not Available | Positive | 5255203 - 5255691 | 17006.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
