Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m16 family metallopeptidase | C4F17_RS23855 | Not Available | Positive | 5108126 - 5109442 | 46779.7 |
| lysr family transcriptional regulator argp | C4F17_RS23860 | Not Available | Negative | 5109448 - 5110362 | 32338.0 |
| lyse/argo family amino acid transporter | C4F17_RS23865 | Not Available | Positive | 5110441 - 5111076 | 21720.1 |
| rsmd family rna methyltransferase | C4F17_RS23870 | Not Available | Positive | 5111132 - 5111779 | 22520.9 |
| pantetheine-phosphate adenylyltransferase | C4F17_RS23875 | Not Available | Positive | 5111823 - 5112326 | 18516.4 |
| 5-oxoprolinase subunit pxpb | C4F17_RS23880 | Not Available | Positive | 5112333 - 5112995 | 23282.1 |
| biotin-dependent carboxyltransferase family protein | C4F17_RS23885 | Not Available | Positive | 5112992 - 5113990 | 34868.4 |
| 5-oxoprolinase subunit pxpa | C4F17_RS23890 | Not Available | Positive | 5114014 - 5114754 | 26328.4 |
| alpha/beta fold hydrolase | C4F17_RS23895 | Not Available | Negative | 5114821 - 5115525 | 25431.9 |
| yip1 family protein | C4F17_RS23900 | Not Available | Positive | 5115640 - 5116281 | 21997.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
