Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit ii | C4F17_RS23755 | Not Available | Positive | 5089383 - 5090561 | 42828.9 |
| cytochrome c oxidase subunit i | C4F17_RS23760 | Not Available | Positive | 5090605 - 5092245 | 60839.3 |
| cytochrome oxidase small assembly protein | C4F17_RS33480 | Not Available | Positive | 5092277 - 5092390 | 4314.48 |
| cytochrome c oxidase assembly protein | C4F17_RS23765 | Not Available | Positive | 5092420 - 5093046 | 22958.8 |
| duf2970 domain-containing protein | C4F17_RS23770 | Not Available | Positive | 5093043 - 5093261 | 7887.73 |
| cytochrome c oxidase subunit 3 | C4F17_RS23775 | Not Available | Positive | 5093314 - 5094195 | 32924.1 |
| twin transmembrane helix small protein | C4F17_RS23780 | Not Available | Negative | 5094276 - 5094506 | 8439.93 |
| surf1 family protein | C4F17_RS23785 | Not Available | Positive | 5094534 - 5095406 | 32014.5 |
| hypothetical protein | C4F17_RS23790 | Not Available | Positive | 5095393 - 5096073 | 25173.4 |
| cox15/ctaa family protein | C4F17_RS23795 | Not Available | Positive | 5096107 - 5097342 | 44366.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
