Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | C4F17_RS23455 | Not Available | Positive | 5033802 - 5034668 | 30096.7 |
| branched-chain amino acid abc transporter permease | C4F17_RS23460 | Not Available | Positive | 5034683 - 5035714 | 36498.2 |
| hypothetical protein | C4F17_RS23465 | Not Available | Negative | 5035692 - 5036195 | 18236.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | C4F17_RS23470 | Not Available | Positive | 5036381 - 5037385 | 34365.8 |
| iclr family transcriptional regulator c-terminal domain-containing protein | C4F17_RS23475 | Not Available | Negative | 5037416 - 5038201 | 28251.3 |
| 3-oxoacid coa-transferase subunit a | C4F17_RS23480 | Not Available | Positive | 5038328 - 5039029 | 24644.8 |
| 3-oxoacid coa-transferase subunit b | C4F17_RS23485 | Not Available | Positive | 5039026 - 5039673 | 22844.8 |
| 3-oxoadipyl-coa thiolase | C4F17_RS23490 | Not Available | Positive | 5039703 - 5040908 | 41680.3 |
| hypothetical protein | C4F17_RS23495 | Not Available | Negative | 5040948 - 5041409 | 16635.8 |
| hypothetical protein | C4F17_RS23500 | Not Available | Positive | 5041711 - 5042127 | 14353.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
