Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp family type ivb pilin | C4F17_RS23405 | Not Available | Negative | 5023372 - 5023557 | 6208.58 |
| murein l,d-transpeptidase family protein | C4F17_RS23410 | Not Available | Negative | 5023973 - 5025439 | 52811.8 |
| nuclear transport factor 2 family protein | C4F17_RS23415 | Not Available | Negative | 5025439 - 5026566 | 39374.7 |
| lysr family transcriptional regulator | C4F17_RS23420 | Not Available | Positive | 5026706 - 5027668 | 35504.8 |
| hydroxyquinol 1,2-dioxygenase | C4F17_RS23425 | Not Available | Positive | 5027789 - 5028310 | 19307.8 |
| hydroxyquinol 1,2-dioxygenase | C4F17_RS23430 | Not Available | Positive | 5028324 - 5029331 | 37807.4 |
| aldehyde dehydrogenase family protein | C4F17_RS23435 | Not Available | Positive | 5029464 - 5030927 | 52658.2 |
| abc transporter substrate-binding protein | C4F17_RS23440 | Not Available | Positive | 5030973 - 5032226 | 44488.0 |
| abc transporter atp-binding protein | C4F17_RS23445 | Not Available | Positive | 5032228 - 5032947 | 25844.5 |
| abc transporter atp-binding protein | C4F17_RS23450 | Not Available | Positive | 5033093 - 5033809 | 25582.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
