Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C4F17_RS23300 | Not Available | Positive | 4996625 - 5000734 | 125211.0 |
| peptidoglycan-associated lipoprotein pal | C4F17_RS23305 | Not Available | Positive | 5000819 - 5001322 | 18488.0 |
| glutamate ligase domain-containing protein | C4F17_RS23310 | Not Available | Positive | 5001432 - 5004527 | 113872.0 |
| peptidase domain-containing abc transporter | C4F17_RS23320 | Not Available | Positive | 5004897 - 5006714 | 65357.3 |
| hlyd family type i secretion periplasmic adaptor subunit | C4F17_RS23325 | Not Available | Positive | 5006743 - 5008059 | 48090.7 |
| tolc family protein | C4F17_RS23330 | Not Available | Positive | 5008071 - 5009633 | 56345.5 |
| sigma 54-interacting transcriptional regulator | C4F17_RS23335 | Not Available | Negative | 5009647 - 5011071 | 52053.1 |
| tadg family pilus assembly protein | C4F17_RS23340 | Not Available | Negative | 5011088 - 5013109 | 68545.3 |
| tade/tadg family type iv pilus assembly protein | C4F17_RS23345 | Not Available | Negative | 5013121 - 5013597 | 16943.4 |
| tade/tadg family type iv pilus assembly protein | C4F17_RS23350 | Not Available | Negative | 5013594 - 5014076 | 16993.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
