Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter assembly complex protein tama | C4F17_RS23250 | Not Available | Negative | 4987479 - 4989416 | 70374.9 |
| vwa domain-containing protein | C4F17_RS23255 | Not Available | Negative | 4989484 - 4990671 | 46095.9 |
| gnat family n-acetyltransferase | C4F17_RS23260 | Not Available | Negative | 4990697 - 4991284 | 21689.1 |
| hypothetical protein | C4F17_RS23265 | Not Available | Negative | 4991311 - 4991556 | 8506.57 |
| aaa family atpase | C4F17_RS23270 | Not Available | Negative | 4991561 - 4992415 | 32423.3 |
| c-type cytochrome | C4F17_RS23275 | Not Available | Positive | 4992576 - 4993268 | 24374.2 |
| protocatechuate 3,4-dioxygenase subunit alpha | C4F17_RS23280 | Not Available | Negative | 4993338 - 4993946 | 22096.8 |
| protocatechuate 3,4-dioxygenase subunit beta | C4F17_RS23285 | Not Available | Negative | 4993964 - 4994689 | 27411.5 |
| lysr substrate-binding domain-containing protein | C4F17_RS23290 | Not Available | Positive | 4994794 - 4995783 | 34720.4 |
| duf1841 family protein | C4F17_RS23295 | Not Available | Negative | 4995889 - 4996323 | 16260.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
