Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system vgr family protein | C4F17_RS01465 | Not Available | Positive | 318509 - 321520 | 106965.0 |
| rhs repeat-associated core domain-containing protein | C4F17_RS01470 | Not Available | Positive | 321582 - 326357 | 176229.0 |
| hypothetical protein | C4F17_RS01475 | Not Available | Positive | 326450 - 326833 | 13425.5 |
| pentapeptide repeat-containing protein | C4F17_RS01480 | Not Available | Positive | 326958 - 327452 | 17198.8 |
| hypothetical protein | C4F17_RS32655 | Not Available | Positive | 327493 - 327888 | 13924.8 |
| rhs repeat-associated core domain-containing protein | C4F17_RS01490 | Not Available | Positive | 327947 - 332650 | 174260.0 |
| hypothetical protein | C4F17_RS32660 | Not Available | Positive | 332647 - 333060 | 15975.1 |
| hypothetical protein | C4F17_RS32665 | Not Available | Positive | 333600 - 333989 | 14630.6 |
| sugar abc transporter substrate-binding protein | C4F17_RS01495 | Not Available | Positive | 334484 - 335494 | 34305.5 |
| abc transporter permease | C4F17_RS01500 | Not Available | Positive | 335511 - 336470 | 32833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
