Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | C4F17_RS22700 | Not Available | Positive | 4875998 - 4876429 | 15750.2 |
| 30s ribosomal protein s9 | C4F17_RS22705 | Not Available | Positive | 4876442 - 4876834 | 14274.3 |
| iron-sulfur cluster insertion protein erpa | C4F17_RS22710 | Not Available | Positive | 4877017 - 4877382 | 12923.1 |
| multidrug transporter subunit mdtd | C4F17_RS22715 | Not Available | Positive | 4877464 - 4878888 | 50005.7 |
| anhydro-n-acetylmuramic acid kinase | C4F17_RS22720 | Not Available | Negative | 4878902 - 4880026 | 38397.9 |
| m23 family metallopeptidase | C4F17_RS22725 | Not Available | Negative | 4880066 - 4881412 | 47735.1 |
| tyrosine--trna ligase | C4F17_RS22730 | Not Available | Positive | 4881596 - 4882804 | 44210.0 |
| ompa family protein | C4F17_RS22735 | Not Available | Negative | 4882816 - 4883415 | 21548.6 |
| fecr domain-containing protein | C4F17_RS22740 | Not Available | Negative | 4883412 - 4883876 | 15847.2 |
| cation diffusion facilitator family transporter | C4F17_RS22745 | Not Available | Positive | 4884028 - 4884945 | 33034.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
