Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | C4F17_RS22595 | Not Available | Positive | 4854360 - 4855409 | 38124.7 |
| histone deacetylase family protein | C4F17_RS22600 | Not Available | Positive | 4855450 - 4856490 | 37471.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | C4F17_RS22605 | Not Available | Positive | 4856631 - 4857611 | 34700.0 |
| tetr/acrr family transcriptional regulator | C4F17_RS22610 | Not Available | Negative | 4857598 - 4858167 | 20738.6 |
| mfs transporter | C4F17_RS22615 | Not Available | Positive | 4858256 - 4859506 | 42117.9 |
| had-iib family hydrolase | C4F17_RS22620 | Not Available | Negative | 4859520 - 4860311 | 28381.5 |
| atp-binding cassette domain-containing protein | C4F17_RS22625 | Not Available | Positive | 4860461 - 4861456 | 36599.4 |
| abc transporter permease | C4F17_RS22630 | Not Available | Positive | 4861459 - 4862295 | 29768.1 |
| abc transporter permease | C4F17_RS22635 | Not Available | Positive | 4862607 - 4863410 | 28601.5 |
| peptide chain release factor 3 | C4F17_RS22640 | Not Available | Negative | 4863425 - 4865053 | 60301.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
