Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | C4F17_RS22400 | Not Available | Positive | 4809269 - 4810453 | 41050.8 |
| glutamate carboxypeptidase | C4F17_RS22405 | Not Available | Positive | 4810540 - 4811790 | 44134.8 |
| acyl-coa dehydrogenase family protein | C4F17_RS22410 | Not Available | Positive | 4811909 - 4813039 | 40151.9 |
| metallophosphoesterase | C4F17_RS22415 | Not Available | Positive | 4813036 - 4813869 | 29884.1 |
| indoleacetamide hydrolase | C4F17_RS22420 | Not Available | Positive | 4813967 - 4815490 | 51367.2 |
| helix-turn-helix transcriptional regulator | C4F17_RS22425 | Not Available | Negative | 4815513 - 4816280 | 28732.4 |
| ychj family protein | C4F17_RS22430 | Not Available | Positive | 4816416 - 4816850 | 16198.0 |
| phosphomethylpyrimidine synthase thic | C4F17_RS22435 | Not Available | Positive | 4817074 - 4818957 | 69529.7 |
| had family hydrolase | C4F17_RS22440 | Not Available | Positive | 4818990 - 4819682 | 24489.4 |
| thioredoxin family protein | C4F17_RS22445 | Not Available | Positive | 4819737 - 4820063 | 11886.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
