Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | C4F17_RS21855 | Not Available | Negative | 4690885 - 4691832 | 32583.8 |
| yran family protein | C4F17_RS21860 | Not Available | Positive | 4691879 - 4692247 | 13451.1 |
| sis domain-containing protein | C4F17_RS21865 | Not Available | Positive | 4692334 - 4692978 | 21838.0 |
| bon domain-containing protein | C4F17_RS21870 | Not Available | Positive | 4692975 - 4693781 | 27754.2 |
| nad(p)-dependent oxidoreductase | C4F17_RS21875 | Not Available | Negative | 4693825 - 4694733 | 31437.8 |
| merr family transcriptional regulator | C4F17_RS21880 | Not Available | Positive | 4694821 - 4695303 | 18058.8 |
| mfs transporter | C4F17_RS21885 | Not Available | Positive | 4695300 - 4696850 | 55377.0 |
| pilt/pilu family type 4a pilus atpase | C4F17_RS21890 | Not Available | Negative | 4696868 - 4698004 | 41815.5 |
| type iv pilus twitching motility protein pilt | C4F17_RS21895 | Not Available | Negative | 4698141 - 4699184 | 38164.1 |
| yggs family pyridoxal phosphate-dependent enzyme | C4F17_RS21900 | Not Available | Positive | 4699236 - 4699946 | 25078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
