Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response endonuclease pdem | C4F17_RS21650 | Not Available | Positive | 4654701 - 4655381 | 24345.2 |
| tpm domain-containing protein | C4F17_RS21655 | Not Available | Negative | 4655513 - 4656040 | 19913.0 |
| tpm domain-containing protein | C4F17_RS21660 | Not Available | Negative | 4656046 - 4656906 | 28501.5 |
| lema family protein | C4F17_RS21670 | Not Available | Negative | 4657033 - 4657632 | 22333.6 |
| hypothetical protein | C4F17_RS21675 | Not Available | Positive | 4657678 - 4658439 | 27332.3 |
| abc transporter permease | C4F17_RS21680 | Not Available | Negative | 4658464 - 4659282 | 29468.1 |
| abc transporter permease | C4F17_RS21685 | Not Available | Negative | 4659279 - 4660208 | 32813.4 |
| abc transporter atp-binding protein | C4F17_RS21690 | Not Available | Negative | 4660205 - 4661320 | 40725.0 |
| abc transporter substrate-binding protein | C4F17_RS21695 | Not Available | Negative | 4661317 - 4662363 | 38520.0 |
| isopenicillin n synthase family dioxygenase | C4F17_RS21700 | Not Available | Negative | 4662402 - 4663376 | 35804.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
