Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l22 | C4F17_RS21350 | Not Available | Positive | 4603012 - 4603344 | 12072.8 |
| 30s ribosomal protein s3 | C4F17_RS21355 | Not Available | Positive | 4603362 - 4604273 | 33122.9 |
| 50s ribosomal protein l16 | C4F17_RS21360 | Not Available | Positive | 4604326 - 4604742 | 15360.8 |
| 50s ribosomal protein l29 | C4F17_RS21365 | Not Available | Positive | 4604798 - 4605007 | 7708.41 |
| 30s ribosomal protein s17 | C4F17_RS21370 | Not Available | Positive | 4605017 - 4605286 | 10162.5 |
| peroxiredoxin | C4F17_RS21375 | Not Available | Positive | 4605369 - 4605875 | 17600.0 |
| gnat family n-acetyltransferase | C4F17_RS21380 | Not Available | Negative | 4605881 - 4606468 | 21006.0 |
| cytochrome b/b6 domain-containing protein | C4F17_RS21385 | Not Available | Negative | 4606465 - 4607178 | 25255.0 |
| c-type cytochrome | C4F17_RS21390 | Not Available | Positive | 4607333 - 4607779 | 15714.8 |
| tlpa family protein disulfide reductase | C4F17_RS21395 | Not Available | Negative | 4607830 - 4608327 | 17689.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
