Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C4F17_RS20955 | Not Available | Positive | 4524900 - 4525799 | 32979.0 |
| serine/threonine protein kinase | C4F17_RS20960 | Not Available | Negative | 4525790 - 4526824 | 38847.8 |
| duf2855 family protein | C4F17_RS20965 | Not Available | Negative | 4526858 - 4527973 | 40442.6 |
| n-acyl-d-amino-acid deacylase family protein | C4F17_RS20970 | Not Available | Negative | 4528121 - 4529566 | 51434.3 |
| bug family tripartite tricarboxylate transporter substrate binding protein | C4F17_RS20975 | Not Available | Negative | 4529571 - 4530560 | 34268.6 |
| lysr substrate-binding domain-containing protein | C4F17_RS20980 | Not Available | Positive | 4530731 - 4531624 | 32667.5 |
| organic hydroperoxide resistance protein | C4F17_RS20985 | Not Available | Negative | 4531697 - 4532122 | 14228.0 |
| marr family winged helix-turn-helix transcriptional regulator | C4F17_RS20990 | Not Available | Negative | 4532220 - 4532675 | 16820.6 |
| glycosyltransferase family 39 protein | C4F17_RS20995 | Not Available | Positive | 4532788 - 4534389 | 59077.4 |
| abc transporter permease | C4F17_RS21000 | Not Available | Negative | 4534397 - 4535236 | 30729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
