Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate phosphoribosyltransferase | C4F17_RS20805 | Not Available | Negative | 4486264 - 4487709 | 52589.4 |
| bifunctional nicotinamide-nucleotide adenylyltransferase/nudix hydroxylase | C4F17_RS20810 | Not Available | Negative | 4487775 - 4488854 | 40677.0 |
| pseudouridine synthase | C4F17_RS20815 | Not Available | Positive | 4488938 - 4489771 | 30953.7 |
| winged helix dna-binding domain-containing protein | C4F17_RS20820 | Not Available | Positive | 4489738 - 4490868 | 40757.2 |
| response regulator transcription factor | C4F17_RS20825 | Not Available | Positive | 4491025 - 4491681 | 24146.0 |
| sensor histidine kinase | C4F17_RS20830 | Not Available | Positive | 4491749 - 4493143 | 50522.7 |
| hypothetical protein | C4F17_RS20835 | Not Available | Positive | 4493301 - 4493639 | 10986.9 |
| zinc-dependent alcohol dehydrogenase family protein | C4F17_RS20840 | Not Available | Negative | 4493751 - 4494761 | 35141.6 |
| lysr family transcriptional regulator | C4F17_RS20845 | Not Available | Positive | 4494858 - 4495778 | 33407.5 |
| abc transporter substrate-binding protein | C4F17_RS20850 | Not Available | Positive | 4495852 - 4496904 | 38217.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
