Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl synthase n-terminal-like domain-containing protein | C4F17_RS01215 | Not Available | Positive | 256570 - 257640 | 37325.2 |
| hypothetical protein | C4F17_RS01220 | Not Available | Positive | 257637 - 258125 | 17859.6 |
| n-methyl-d-aspartate receptor nmdar2c subunit | C4F17_RS01225 | Not Available | Negative | 258135 - 258755 | 23483.6 |
| lytic murein transglycosylase b | C4F17_RS01230 | Not Available | Negative | 258761 - 259864 | 39670.3 |
| transglutaminasetgpa domain-containing protein | C4F17_RS01235 | Not Available | Negative | 259918 - 261939 | 74130.9 |
| duf58 domain-containing protein | C4F17_RS01240 | Not Available | Negative | 261956 - 262921 | 34969.3 |
| aaa family atpase | C4F17_RS01245 | Not Available | Negative | 262918 - 263838 | 32890.9 |
| histone deacetylase family protein | C4F17_RS01250 | Not Available | Positive | 263912 - 264865 | 34945.5 |
| mechanosensitive ion channel family protein | C4F17_RS01255 | Not Available | Positive | 264905 - 266188 | 46398.2 |
| aspartate aminotransferase family protein | C4F17_RS01260 | Not Available | Negative | 266200 - 267471 | 45115.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
