Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | C4F17_RS01015 | Not Available | Negative | 198139 - 199908 | 64624.2 |
| type vi secretion system vgr family protein | C4F17_RS01020 | Not Available | Negative | 199926 - 202676 | 100810.0 |
| abc transporter substrate-binding protein | C4F17_RS01025 | Not Available | Positive | 203146 - 204177 | 36823.6 |
| abc transporter atp-binding protein | C4F17_RS01030 | Not Available | Positive | 204184 - 204966 | 28893.2 |
| abc transporter permease | C4F17_RS01035 | Not Available | Positive | 204977 - 205840 | 31043.9 |
| fad-dependent oxidoreductase | C4F17_RS01040 | Not Available | Positive | 205893 - 207275 | 50281.1 |
| caib/baif coa transferase family protein | C4F17_RS01045 | Not Available | Positive | 207272 - 208441 | 41987.8 |
| enoyl-coa hydratase-related protein | C4F17_RS01050 | Not Available | Positive | 208438 - 209214 | 27964.2 |
| ferredoxin | C4F17_RS01055 | Not Available | Positive | 209243 - 209578 | 11634.0 |
| lysr family transcriptional regulator | C4F17_RS01060 | Not Available | Positive | 209606 - 210520 | 33374.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
