Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | C4F17_RS00415 | Not Available | Positive | 85626 - 86399 | 27110.3 |
| peptidoglycan dd-metalloendopeptidase family protein | C4F17_RS00420 | Not Available | Positive | 86411 - 87328 | 31623.5 |
| sigma-70 family rna polymerase sigma factor | C4F17_RS00425 | Not Available | Positive | 87333 - 88358 | 37354.2 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | C4F17_RS00430 | Not Available | Positive | 88400 - 89836 | 53084.9 |
| bax inhibitor-1/ycca family protein | C4F17_RS00435 | Not Available | Negative | 89896 - 90597 | 24802.0 |
| glcg/hbps family heme-binding protein | C4F17_RS00440 | Not Available | Positive | 90775 - 91182 | 13842.6 |
| hemin uptake protein hemp | C4F17_RS00445 | Not Available | Negative | 91369 - 91578 | 7326.99 |
| exbd/tolr family protein | C4F17_RS00450 | Not Available | Negative | 91673 - 92086 | 15390.5 |
| mota/tolq/exbb proton channel family protein | C4F17_RS00455 | Not Available | Negative | 92092 - 92805 | 25460.0 |
| energy transducer tonb | C4F17_RS00460 | Not Available | Negative | 92828 - 93538 | 24810.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
