Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 78613 - 78688 | Not Available |
| sura n-terminal domain-containing protein | C4F17_RS00370 | Not Available | Positive | 78766 - 80691 | 69811.7 |
| histidine phosphatase family protein | C4F17_RS00375 | Not Available | Positive | 80807 - 81481 | 24967.7 |
| hypothetical protein | C4F17_RS00380 | Not Available | Negative | 81509 - 81853 | 13324.1 |
| glsb/yeaq/ymge family stress response membrane protein | C4F17_RS00385 | Not Available | Negative | 81853 - 82101 | 8425.7 |
| ybhb/ybcl family raf kinase inhibitor-like protein | C4F17_RS00390 | Not Available | Positive | 82251 - 82883 | 21648.7 |
| Trna-his | Not Available | Not Available | Positive | 82969 - 83044 | Not Available |
| h-ns family nucleoid-associated regulatory protein | C4F17_RS00400 | Not Available | Positive | 83317 - 83661 | 12381.7 |
| nadph:quinone oxidoreductase family protein | C4F17_RS00405 | Not Available | Negative | 83752 - 84738 | 34337.8 |
| 5'/3'-nucleotidase sure | C4F17_RS00410 | Not Available | Positive | 84866 - 85624 | 26983.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
