Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | C4F17_RS00220 | Not Available | Positive | 45677 - 46642 | 32770.1 |
| hpp family protein | C4F17_RS00225 | Not Available | Negative | 46734 - 47861 | 40582.5 |
| multidrug effflux mfs transporter | C4F17_RS00230 | Not Available | Negative | 47881 - 49116 | 44646.5 |
| rna polymerase sigma factor rpod | C4F17_RS00235 | Not Available | Negative | 49219 - 51402 | 81510.5 |
| hypothetical protein | C4F17_RS33265 | Not Available | Positive | 51395 - 51724 | 11452.4 |
| dna primase | C4F17_RS00240 | Not Available | Negative | 51848 - 53869 | 74001.9 |
| yihy/virulence factor brkb family protein | C4F17_RS00245 | Not Available | Positive | 53952 - 54899 | 34424.8 |
| 3-hydroxyacyl-coa dehydrogenase | C4F17_RS00250 | Not Available | Negative | 54847 - 55605 | 25760.4 |
| phasin family protein | C4F17_RS00255 | Not Available | Negative | 55737 - 56288 | 18823.1 |
| histone deacetylase | C4F17_RS00260 | Not Available | Positive | 56471 - 57397 | 33970.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
