Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | C4F17_RS09385 | Not Available | Negative | 2019965 - 2021452 | 51862.9 |
| efflux rnd transporter permease subunit | C4F17_RS09390 | Not Available | Negative | 2021463 - 2024762 | 116232.0 |
| efflux rnd transporter permease subunit | C4F17_RS09400 | Not Available | Negative | 2025181 - 2028297 | 110266.0 |
| efflux rnd transporter periplasmic adaptor subunit | C4F17_RS09405 | Not Available | Negative | 2028347 - 2029858 | 51222.6 |
| duf6622 family protein | C4F17_RS09410 | Not Available | Positive | 2030096 - 2030638 | 19478.7 |
| sterol desaturase family protein | C4F17_RS09415 | Not Available | Positive | 2030670 - 2031626 | 36699.5 |
| 2tm domain-containing protein | C4F17_RS09420 | Not Available | Positive | 2031623 - 2031919 | 10777.1 |
| sensor histidine kinase | C4F17_RS09425 | Not Available | Positive | 2031973 - 2032986 | 36520.8 |
| lytr/algr family response regulator transcription factor | C4F17_RS09430 | Not Available | Positive | 2032996 - 2033832 | 30313.9 |
| hypothetical protein | C4F17_RS09435 | Not Available | Negative | 2033915 - 2034262 | 12326.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
