Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | C4F17_RS09335 | Not Available | Positive | 2010114 - 2010818 | 25153.2 |
| atp-binding protein | C4F17_RS09340 | Not Available | Positive | 2010728 - 2012644 | 69445.3 |
| undecaprenyl-diphosphate phosphatase | C4F17_RS09345 | Not Available | Negative | 2012656 - 2013480 | 29871.3 |
| hypothetical protein | C4F17_RS09350 | Not Available | Positive | 2013635 - 2014519 | 32585.5 |
| aspartate/glutamate racemase family protein | C4F17_RS09355 | Not Available | Negative | 2014511 - 2015155 | 22676.3 |
| transporter substrate-binding domain-containing protein | C4F17_RS09360 | Not Available | Negative | 2015169 - 2016083 | 33165.8 |
| aspartate aminotransferase family protein | C4F17_RS09365 | Not Available | Negative | 2016138 - 2017472 | 47404.1 |
| murr/rpir family transcriptional regulator | C4F17_RS09370 | Not Available | Positive | 2017619 - 2018485 | 31071.1 |
| gntr family transcriptional regulator | C4F17_RS09375 | Not Available | Negative | 2018504 - 2019232 | 27237.6 |
| spw repeat protein | C4F17_RS09380 | Not Available | Positive | 2019538 - 2019903 | 13194.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
