Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cusa/czca family heavy metal efflux rnd transporter | C4F17_RS09085 | Not Available | Negative | 1948469 - 1951684 | 115924.0 |
| efflux rnd transporter periplasmic adaptor subunit | C4F17_RS09090 | Not Available | Negative | 1951695 - 1953056 | 48460.0 |
| tolc family protein | C4F17_RS09095 | Not Available | Negative | 1953075 - 1954439 | 47871.6 |
| cation efflux protein, czci family | C4F17_RS09100 | Not Available | Negative | 1954535 - 1954909 | 14026.5 |
| heavy metal response regulator transcription factor | C4F17_RS09105 | Not Available | Positive | 1955069 - 1955746 | 25660.2 |
| heavy metal sensor histidine kinase | C4F17_RS09110 | Not Available | Positive | 1955743 - 1957068 | 48529.4 |
| cation:proton antiporter | C4F17_RS09115 | Not Available | Negative | 1957073 - 1958326 | 43539.1 |
| heavy metal translocating p-type atpase | C4F17_RS09120 | Not Available | Negative | 1958414 - 1960735 | 80695.9 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | C4F17_RS09125 | Not Available | Positive | 1960806 - 1961276 | 17480.8 |
| serine o-acetyltransferase | C4F17_RS09130 | Not Available | Negative | 1961286 - 1962059 | 27642.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
