Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase | C4F17_RS08495 | Not Available | Negative | 1818996 - 1820327 | 48701.3 |
| gamma-glutamylcyclotransferase | C4F17_RS08500 | Not Available | Negative | 1820555 - 1820947 | 14250.2 |
| dmt family transporter | C4F17_RS08505 | Not Available | Positive | 1820989 - 1821912 | 32473.8 |
| swib/mdm2 domain-containing protein | C4F17_RS08510 | Not Available | Positive | 1822067 - 1822519 | 15358.2 |
| arac family transcriptional regulator | C4F17_RS08515 | Not Available | Negative | 1822606 - 1823349 | 26890.3 |
| hypothetical protein | C4F17_RS08520 | Not Available | Positive | 1823453 - 1823752 | 10427.5 |
| thiamine pyrophosphate-binding protein | C4F17_RS08525 | Not Available | Negative | 1823712 - 1825442 | 61710.5 |
| tetr/acrr family transcriptional regulator | C4F17_RS08530 | Not Available | Positive | 1825536 - 1826210 | 25664.6 |
| tripartite tricarboxylate transporter substrate binding protein | C4F17_RS08535 | Not Available | Positive | 1826369 - 1827361 | 34285.3 |
| abc transporter permease | C4F17_RS08540 | Not Available | Positive | 1827384 - 1828157 | 28205.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
