Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | C4F17_RS08210 | Not Available | Negative | 1760372 - 1762297 | 68484.9 |
| branched-chain amino acid abc transporter permease | C4F17_RS08215 | Not Available | Negative | 1762323 - 1763198 | 30622.8 |
| abc transporter substrate-binding protein | C4F17_RS08220 | Not Available | Negative | 1763282 - 1764511 | 43868.7 |
| abc transporter atp-binding protein | C4F17_RS08225 | Not Available | Positive | 1764731 - 1766587 | 67649.6 |
| voc family protein | C4F17_RS08230 | Not Available | Negative | 1766602 - 1767033 | 15636.6 |
| tetr/acrr family transcriptional regulator | C4F17_RS08235 | Not Available | Positive | 1767117 - 1767698 | 20700.8 |
| duf2868 domain-containing protein | C4F17_RS08240 | Not Available | Positive | 1768045 - 1769448 | 50640.7 |
| gtpase/duf3482 domain-containing protein | C4F17_RS08245 | Not Available | Positive | 1769445 - 1770869 | 51331.1 |
| sialic acid trap transporter substrate-binding protein siap | C4F17_RS08250 | Not Available | Negative | 1770876 - 1771871 | 36395.1 |
| hypothetical protein | C4F17_RS32720 | Not Available | Positive | 1772049 - 1772207 | 5301.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
