Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf349 domain-containing protein | C4F17_RS07625 | Not Available | Negative | 1636361 - 1639192 | 99745.1 |
| duf748 domain-containing protein | C4F17_RS07630 | Not Available | Negative | 1639394 - 1643218 | 134829.0 |
| hypothetical protein | C4F17_RS33110 | Not Available | Positive | 1643136 - 1643387 | 9264.99 |
| lytic transglycosylase domain-containing protein | C4F17_RS07635 | Not Available | Positive | 1643894 - 1644745 | 29985.1 |
| serine hydroxymethyltransferase | C4F17_RS07640 | Not Available | Positive | 1644943 - 1646187 | 44832.9 |
| transcriptional regulator nrdr | C4F17_RS07645 | Not Available | Positive | 1646206 - 1646649 | 17109.7 |
| type iv pilin protein | C4F17_RS07650 | Not Available | Negative | 1646688 - 1647149 | 16750.1 |
| pilus assembly protein | C4F17_RS07655 | Not Available | Negative | 1647170 - 1649308 | 74344.7 |
| pilx n-terminal domain-containing pilus assembly protein | C4F17_RS07660 | Not Available | Negative | 1649347 - 1650033 | 24795.2 |
| pilw family protein | C4F17_RS07665 | Not Available | Negative | 1650030 - 1650854 | 29163.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
