Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | C4F17_RS07575 | Not Available | Negative | 1627973 - 1628950 | 35279.2 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | C4F17_RS07580 | Not Available | Negative | 1628964 - 1629944 | 36580.7 |
| dna-3-methyladenine glycosylase family protein | C4F17_RS07585 | Not Available | Negative | 1629960 - 1630610 | 24245.3 |
| cysteine--trna ligase | C4F17_RS07590 | Not Available | Negative | 1630628 - 1632004 | 50750.3 |
| tetratricopeptide repeat protein | C4F17_RS07595 | Not Available | Positive | 1632194 - 1632781 | 21445.5 |
| peptidylprolyl isomerase | C4F17_RS07600 | Not Available | Positive | 1632861 - 1633454 | 20865.9 |
| peptidylprolyl isomerase | C4F17_RS07605 | Not Available | Positive | 1633481 - 1633993 | 18392.8 |
| udp-2,3-diacylglucosamine diphosphatase | C4F17_RS07610 | Not Available | Positive | 1634019 - 1634780 | 28323.7 |
| zinc-dependent peptidase | C4F17_RS07615 | Not Available | Positive | 1634798 - 1635601 | 30030.9 |
| hypothetical protein | C4F17_RS07620 | Not Available | Positive | 1635683 - 1636279 | 21170.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
