Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxysqualene dehydroxylase hpne | C4F17_RS07380 | Not Available | Positive | 1590559 - 1591815 | 43949.4 |
| hypothetical protein | C4F17_RS07385 | Not Available | Positive | 1591812 - 1592120 | 11486.1 |
| lyse family translocator | C4F17_RS07390 | Not Available | Negative | 1592137 - 1592781 | 22678.3 |
| nipsnap family protein | C4F17_RS07395 | Not Available | Positive | 1592901 - 1593206 | 11929.3 |
| had family hydrolase | C4F17_RS07400 | Not Available | Negative | 1593211 - 1593942 | 26606.7 |
| ferrochelatase | C4F17_RS07405 | Not Available | Positive | 1593958 - 1594989 | 37845.4 |
| thioredoxin family protein | C4F17_RS07410 | Not Available | Negative | 1594997 - 1595560 | 20775.7 |
| duf1993 family protein | C4F17_RS07415 | Not Available | Negative | 1595698 - 1596204 | 18435.2 |
| alpha/beta fold hydrolase | C4F17_RS07420 | Not Available | Negative | 1596261 - 1597154 | 33169.5 |
| branched-chain amino acid abc transporter permease | C4F17_RS07425 | Not Available | Negative | 1597151 - 1598218 | 38224.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
