Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | C4F17_RS07330 | Not Available | Negative | 1577257 - 1578522 | 46323.0 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | C4F17_RS07335 | Not Available | Negative | 1578632 - 1579240 | 22254.8 |
| trigger factor | C4F17_RS07340 | Not Available | Negative | 1579356 - 1580672 | 48581.8 |
| tetratricopeptide repeat protein | C4F17_RS07345 | Not Available | Positive | 1580939 - 1581916 | 33658.3 |
| Trna-leu | Not Available | Not Available | Positive | 1582004 - 1582090 | Not Available |
| efflux rnd transporter permease subunit | C4F17_RS07355 | Not Available | Negative | 1582193 - 1585351 | 114280.0 |
| efflux rnd transporter periplasmic adaptor subunit | C4F17_RS07360 | Not Available | Negative | 1585348 - 1586559 | 41628.4 |
| potassium transporter kup | C4F17_RS07365 | Not Available | Negative | 1586683 - 1588527 | 66163.3 |
| squalene synthase hpnc | C4F17_RS07370 | Not Available | Positive | 1588681 - 1589595 | 34069.9 |
| presqualene diphosphate synthase hpnd | C4F17_RS07375 | Not Available | Positive | 1589592 - 1590431 | 31485.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
