Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| simpl domain-containing protein | C4F17_RS06695 | Not Available | Negative | 1449380 - 1450084 | 24434.1 |
| hypothetical protein | C4F17_RS06700 | Not Available | Negative | 1450159 - 1450521 | 13189.7 |
| two-component system response regulator ompr | C4F17_RS06705 | Not Available | Positive | 1450695 - 1451426 | 27176.9 |
| sensor histidine kinase | C4F17_RS06710 | Not Available | Positive | 1451502 - 1452923 | 52016.5 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | C4F17_RS06715 | Not Available | Negative | 1452935 - 1453423 | 16982.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | C4F17_RS06720 | Not Available | Negative | 1453420 - 1454142 | 25480.8 |
| transcription-repair coupling factor | C4F17_RS06725 | Not Available | Positive | 1454262 - 1457744 | 129090.0 |
| phosphoserine phosphatase serb | C4F17_RS06730 | Not Available | Positive | 1457741 - 1458454 | 25664.3 |
| ldh family oxidoreductase | C4F17_RS06735 | Not Available | Positive | 1458711 - 1459775 | 37593.2 |
| duf6172 family protein | C4F17_RS06740 | Not Available | Negative | 1459789 - 1460118 | 12307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
