Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | C4F17_RS06545 | Not Available | Negative | 1419473 - 1420186 | 25422.1 |
| lipid-a-disaccharide synthase | C4F17_RS06550 | Not Available | Negative | 1420158 - 1421306 | 42023.3 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | C4F17_RS06555 | Not Available | Negative | 1421317 - 1422105 | 27980.6 |
| 3-hydroxyacyl-acp dehydratase fabz | C4F17_RS06560 | Not Available | Negative | 1422136 - 1422612 | 17849.1 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | C4F17_RS06565 | Not Available | Negative | 1422609 - 1423586 | 34195.2 |
| omph family outer membrane protein | C4F17_RS06570 | Not Available | Negative | 1423601 - 1424152 | 20467.3 |
| outer membrane protein assembly factor bama | C4F17_RS06575 | Not Available | Negative | 1424153 - 1426588 | 90105.3 |
| rip metalloprotease rsep | C4F17_RS06580 | Not Available | Negative | 1426627 - 1427997 | 49001.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C4F17_RS06585 | Not Available | Negative | 1428031 - 1429218 | 41948.7 |
| phosphatidate cytidylyltransferase | C4F17_RS06590 | Not Available | Negative | 1429215 - 1430060 | 30479.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
