Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc metalloprotease ftsh | C4F17_RS06495 | Not Available | Negative | 1408176 - 1410092 | 70122.6 |
| rlme family rna methyltransferase | C4F17_RS06500 | Not Available | Negative | 1410260 - 1410928 | 24156.3 |
| yhby family rna-binding protein | C4F17_RS06505 | Not Available | Positive | 1410962 - 1411441 | 17774.9 |
| glycosyltransferase | C4F17_RS06510 | Not Available | Positive | 1411483 - 1412202 | 27772.2 |
| duf4149 domain-containing protein | C4F17_RS06515 | Not Available | Negative | 1412242 - 1412658 | 15154.1 |
| transcription elongation factor grea | C4F17_RS06520 | Not Available | Negative | 1412673 - 1413149 | 17176.3 |
| kdo hydroxylase family protein | C4F17_RS06525 | Not Available | Negative | 1413216 - 1414085 | 32531.9 |
| carbamoyl-phosphate synthase large subunit | C4F17_RS06530 | Not Available | Negative | 1414097 - 1417345 | 117649.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | C4F17_RS06535 | Not Available | Negative | 1417338 - 1418537 | 42727.3 |
| trmh family rna methyltransferase | C4F17_RS06540 | Not Available | Negative | 1418680 - 1419465 | 27379.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
