Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C4F17_RS06000 | Not Available | Positive | 1306802 - 1307635 | 29621.2 |
| pilt/pilu family type 4a pilus atpase | C4F17_RS06005 | Not Available | Positive | 1307700 - 1308848 | 41912.6 |
| succinyl-diaminopimelate desuccinylase | C4F17_RS06010 | Not Available | Positive | 1308879 - 1310069 | 42085.1 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | C4F17_RS06015 | Not Available | Positive | 1310066 - 1310944 | 31289.2 |
| abc-f family atp-binding cassette domain-containing protein | C4F17_RS06020 | Not Available | Positive | 1311114 - 1313105 | 72785.0 |
| hypothetical protein | C4F17_RS06025 | Not Available | Positive | 1313135 - 1313638 | 17654.8 |
| hypothetical protein | C4F17_RS32685 | Not Available | Negative | 1313589 - 1313825 | 8386.63 |
| helix-turn-helix domain-containing protein | C4F17_RS06030 | Not Available | Negative | 1313830 - 1314063 | 8714.84 |
| helix-turn-helix domain-containing protein | C4F17_RS06035 | Not Available | Positive | 1314135 - 1314851 | 26678.3 |
| fasciclin domain-containing protein | C4F17_RS06040 | Not Available | Negative | 1315068 - 1315628 | 18949.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
