Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptg | C4F17_RS05950 | Not Available | Positive | 1294379 - 1295491 | 41423.5 |
| sirohydrochlorin chelatase | C4F17_RS05955 | Not Available | Positive | 1295488 - 1295874 | 13782.9 |
| cysb family hth-type transcriptional regulator | C4F17_RS05960 | Not Available | Positive | 1295937 - 1296878 | 34971.2 |
| pyridoxal phosphate-dependent aminotransferase | C4F17_RS05965 | Not Available | Positive | 1296875 - 1298047 | 42534.2 |
| duf3309 family protein | C4F17_RS05970 | Not Available | Positive | 1298174 - 1298332 | 5541.31 |
| atp-dependent rna helicase hrpa | C4F17_RS05975 | Not Available | Negative | 1298406 - 1302260 | 143869.0 |
| amino-acid n-acetyltransferase | C4F17_RS05980 | Not Available | Positive | 1302385 - 1303731 | 49543.6 |
| lyse family translocator | C4F17_RS05985 | Not Available | Positive | 1303749 - 1304387 | 22223.8 |
| duf3829 domain-containing protein | C4F17_RS05990 | Not Available | Positive | 1304479 - 1305489 | 36253.8 |
| succinyldiaminopimelate transaminase | C4F17_RS05995 | Not Available | Positive | 1305541 - 1306761 | 44063.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
