Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfed family protein | C4F17_RS05900 | Not Available | Positive | 1286939 - 1287364 | 14766.9 |
| spfh domain-containing protein | C4F17_RS05905 | Not Available | Positive | 1287402 - 1288331 | 33586.6 |
| Trna-ser | Not Available | Not Available | Positive | 1288357 - 1288447 | Not Available |
| hypothetical protein | C4F17_RS05915 | Not Available | Positive | 1288643 - 1288999 | 12762.8 |
| response regulator | C4F17_RS05920 | Not Available | Positive | 1289100 - 1289489 | 13887.7 |
| branched-chain amino acid abc transporter substrate-binding protein | C4F17_RS05925 | Not Available | Negative | 1289558 - 1290775 | 41974.3 |
| hypothetical protein | C4F17_RS05930 | Not Available | Negative | 1290912 - 1291310 | 14110.8 |
| dna polymerase iii subunit chi | C4F17_RS05935 | Not Available | Negative | 1291312 - 1291752 | 16162.2 |
| leucyl aminopeptidase | C4F17_RS05940 | Not Available | Negative | 1291749 - 1293236 | 50852.1 |
| lps export abc transporter permease lptf | C4F17_RS05945 | Not Available | Positive | 1293258 - 1294382 | 41356.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
