Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | C4F17_RS05800 | Not Available | Positive | 1262700 - 1263176 | 18104.0 |
| hypothetical protein | C4F17_RS05805 | Not Available | Positive | 1263277 - 1263657 | 13094.5 |
| rna polymerase sigma factor | C4F17_RS05810 | Not Available | Positive | 1263671 - 1264186 | 19113.3 |
| anti-sigma factor family protein | C4F17_RS05815 | Not Available | Positive | 1264200 - 1265030 | 29979.8 |
| atp-binding protein | C4F17_RS05820 | Not Available | Positive | 1265118 - 1265504 | 13265.9 |
| hypothetical protein | C4F17_RS05825 | Not Available | Positive | 1265607 - 1267082 | 52957.7 |
| translational gtpase typa | C4F17_RS05830 | Not Available | Negative | 1267209 - 1269047 | 67352.9 |
| trna pseudouridine(55) synthase trub | C4F17_RS05835 | Not Available | Negative | 1269044 - 1270009 | 34300.2 |
| 30s ribosome-binding factor rbfa | C4F17_RS05840 | Not Available | Negative | 1270012 - 1270383 | 13721.5 |
| translation initiation factor if-2 | C4F17_RS05845 | Not Available | Negative | 1270405 - 1273395 | 105578.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
