Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | C4F17_RS05750 | Not Available | Positive | 1254831 - 1255661 | 29888.4 |
| nadp-dependent oxidoreductase | C4F17_RS05755 | Not Available | Positive | 1255689 - 1256690 | 35995.0 |
| hypothetical protein | C4F17_RS33100 | Not Available | Positive | 1256975 - 1257277 | 10523.8 |
| glutamine-hydrolyzing gmp synthase | C4F17_RS05765 | Not Available | Negative | 1257317 - 1258936 | 59075.2 |
| type ii toxin-antitoxin system vapc family toxin | C4F17_RS05770 | Not Available | Negative | 1258947 - 1259381 | 15751.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | C4F17_RS05775 | Not Available | Negative | 1259378 - 1259626 | 9068.92 |
| imp dehydrogenase | C4F17_RS05780 | Not Available | Negative | 1259704 - 1261173 | 51723.4 |
| duf4124 domain-containing protein | C4F17_RS05785 | Not Available | Positive | 1261302 - 1261835 | 18679.1 |
| rnfh family protein | C4F17_RS05790 | Not Available | Negative | 1261855 - 1262190 | 12260.8 |
| type ii toxin-antitoxin system rata family toxin | C4F17_RS05795 | Not Available | Negative | 1262190 - 1262636 | 16462.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
