Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | C4F17_RS05200 | Not Available | Negative | 1144881 - 1145540 | 23915.5 |
| lysr family transcriptional regulator | C4F17_RS05205 | Not Available | Positive | 1145613 - 1146533 | 33904.6 |
| abc transporter permease | C4F17_RS05210 | Not Available | Positive | 1146725 - 1147789 | 37499.2 |
| abc transporter atp-binding protein | C4F17_RS05215 | Not Available | Positive | 1147783 - 1148604 | 29193.3 |
| c-type cytochrome | C4F17_RS05220 | Not Available | Positive | 1148606 - 1149769 | 41226.1 |
| dodecin | C4F17_RS05225 | Not Available | Positive | 1149842 - 1150048 | 7579.98 |
| alkylhydroperoxidase domain protein | C4F17_RS05230 | Not Available | Negative | 1150052 - 1150666 | 22336.1 |
| cmd domain protein | C4F17_RS05235 | Not Available | Negative | 1150675 - 1151337 | 22884.9 |
| putative fmn-dependent luciferase-like monooxygenase | C4F17_RS05240 | Not Available | Negative | 1151334 - 1152395 | 36925.8 |
| sgnh/gdsl hydrolase family protein | C4F17_RS05245 | Not Available | Positive | 1152590 - 1153267 | 23705.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
