Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | C4F17_RS04900 | Not Available | Negative | 1063860 - 1065377 | 52751.1 |
| efflux rnd transporter permease subunit | C4F17_RS04905 | Not Available | Negative | 1065398 - 1068493 | 111266.0 |
| efflux rnd transporter periplasmic adaptor subunit | C4F17_RS04910 | Not Available | Negative | 1068486 - 1069637 | 39985.9 |
| response regulator transcription factor | C4F17_RS04915 | Not Available | Positive | 1069818 - 1070519 | 25883.7 |
| sensor histidine kinase | C4F17_RS04920 | Not Available | Positive | 1070512 - 1071921 | 50318.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | C4F17_RS04925 | Not Available | Positive | 1072023 - 1073009 | 34806.0 |
| gnat family n-acetyltransferase | C4F17_RS04930 | Not Available | Negative | 1072978 - 1073451 | 17297.8 |
| ycii family protein | C4F17_RS04935 | Not Available | Positive | 1073529 - 1073837 | 11370.6 |
| efflux transporter outer membrane subunit | C4F17_RS04940 | Not Available | Negative | 1073841 - 1077287 | 125396.0 |
| hypothetical protein | C4F17_RS04945 | Not Available | Negative | 1077275 - 1078585 | 46441.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
