Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase domain-containing protein | C4F17_RS04650 | Not Available | Negative | 1010077 - 1011669 | 57084.0 |
| diguanylate cyclase domain-containing protein | C4F17_RS04655 | Not Available | Positive | 1011958 - 1014693 | 99716.9 |
| sensor domain-containing diguanylate cyclase | C4F17_RS04660 | Not Available | Negative | 1014727 - 1016451 | 60935.2 |
| hypothetical protein | C4F17_RS04665 | Not Available | Negative | 1016485 - 1016784 | 10783.7 |
| mfs transporter | C4F17_RS04670 | Not Available | Negative | 1016864 - 1018054 | 40406.8 |
| lysr substrate-binding domain-containing protein | C4F17_RS04675 | Not Available | Positive | 1018148 - 1019110 | 34795.0 |
| fumarylacetoacetate hydrolase family protein | C4F17_RS04680 | Not Available | Negative | 1019059 - 1019829 | 26908.7 |
| tripartite tricarboxylate transporter substrate binding protein | C4F17_RS04685 | Not Available | Negative | 1019849 - 1020826 | 34220.4 |
| pyridoxal-phosphate-dependent aminotransferase family protein | C4F17_RS04690 | Not Available | Negative | 1020909 - 1022150 | 44427.7 |
| gntr family transcriptional regulator | C4F17_RS04695 | Not Available | Positive | 1022273 - 1022965 | 25676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
