Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PMC12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5395 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | C4F17_RS04605 | Not Available | Positive | 1000915 - 1001712 | 28062.8 |
| paai family thioesterase | C4F17_RS04610 | Not Available | Positive | 1001721 - 1002185 | 16792.0 |
| nadp-dependent oxidoreductase | C4F17_RS04615 | Not Available | Positive | 1002215 - 1003231 | 36041.7 |
| isovaleryl-coa dehydrogenase | C4F17_RS04620 | Not Available | Positive | 1003263 - 1004903 | 58883.6 |
| glutathione s-transferase family protein | C4F17_RS04625 | Not Available | Positive | 1004954 - 1005892 | 34464.3 |
| sdr family oxidoreductase | C4F17_RS04630 | Not Available | Positive | 1005994 - 1006899 | 32172.6 |
| fmn-dependent nadh-azoreductase | C4F17_RS04635 | Not Available | Negative | 1006934 - 1007605 | 24221.9 |
| lysr substrate-binding domain-containing protein | C4F17_RS04640 | Not Available | Positive | 1007739 - 1008644 | 32218.0 |
| manganese efflux pump mntp | C4F17_RS04645 | Not Available | Positive | 1009114 - 1009683 | 19773.5 |
| hypothetical protein | C4F17_RS32670 | Not Available | Positive | 1009858 - 1010061 | 7445.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
